Dealing with metastases is one of the major challenges of cancer therapy
More than 90 percent of deaths caused by cancer are linked to metastases
Understanding the conditions that cause cancer metastases and how these move through the body is key to developing new approaches to cancer treatment
as cancer is also subject to the laws of physics
In honour of their groundbreaking insights into the movement of tumour cells
and the biophysicists Professor Dr Jochen Guck
and Professor Dr Josef Käs are receiving the 2024 Greve Prize from the German National Academy of Sciences Leopoldina
is donated by the Helmut and Hannelore Greve Foundation for Science
“Studying the behaviour of tumour cells from the perspective of physics and linking it to direct insights gained from medical institutions has the potential to develop completely new means of treating cancer.”
The potential for cancer treatment is already apparent with respect to breast cancer
Whether the cancer has metastasised or not is key in determining the success of therapies
it has not been possible to accurately predict when a tumour forms metastases
working together with Professor Dr Axel Niendorf (Hamburg/Germany)
are significantly better at indicating a tumour’s potential to metastasise
They have done so using biophysical concepts
the central idea of which – that metastasising cancer cells must be softer – Jochen Guck played an important role in developing
In order to release themselves from the original tumour and move through the human body
allowing the cancer cell aggregate to become fluid
In the study carried out by Käs and Aktas together with Axel Niendorf
the scientists identified the histological characteristics of the cancer cells that become fluid: they were longer and had deformed cell nuclei
allowing them to “squeeze” through neighbouring tissue
Their study of more than 1,000 breast cancer patients offers a strong indication that these deformed cell and nuclei forms can be used as a reliable marker for a cancer’s aggressiveness
and to predict a tumour’s potential to metastasise
This could permit breast cancer treatments to be more individually tailored to patients
Guck developed a high-throughput method to measure the deformability of cells (real-time deformability cytometry
This method is particularly suited to finding substances that can change cancer cell mechanics to prevent metastases
physician Professor Dr Bahriye Aktas (photo: Stefan Straube | UKL)
biophysicists Professor Dr Jochen Guck (photo: private)
biophysicists Professor Dr Josef Käs (photo: Swen Reichhold | University of Leipzig)
Bahriye Aktas (born in 1975) is Professor of Gynaecology at the University of Leipzig and Director of the Department of Gynaecology at the Leipzig Medical Center
Aktas studied medicine at the Justus Liebig University Gießen/Germany
She completed her medical training as a gynaecologist and obstetrician at the University Hospital Essen/Germany
and was appointed Associate Professor in 2017
That year she switched to the University of Leipzig
her focus is on minimally invasive and robot-assisted surgery
which is used for gentler and precise operations with improved chances of healing
and she also has a particular interest in surgery for cancer treatment
She and her predecessor have helped to globally establish new operation methods that take into account how a tumour spreads
Jochen Guck (born in 1973) studied physics in Würzburg/Germany and obtained his doctorate at the University of Texas in Austin/USA under Josef Käs
They jointly developed tools to investigate cell mechanics (optical cell stretcher)
Following research stays at the University of Leipzig and the University of Cambridge/UK
in 2012 Guck was awarded the Alexander von Humboldt Professorship of Cellular Machines at the Biotechnology Centre of the Technical University of Dresden/Germany and was Senior Director there
Since 2018 he has been Director at the Max Planck Institute for the Physics of Light and
Professor of Biological Optomechanics at the Friedrich-Alexander-Universität Erlangen-Nürnberg
He has developed further photonic and biophysical instruments
including real-time deformability cytometry
These form the basis for many partnerships with medical institutions in Erlangen and at the new Max Planck Centre for Physics and Medicine (MPZPM)
Josef Käs (born in 1961) is Head of the Soft Matter Physics Division at the University of Leipzig’s Peter Debye Institute for Soft Matter Physics
He studied physics at Columbia University in New York/USA and at the Technical University of Munich/Germany
After holding a professorship at the University of Texas in Austin
One of his key research areas concerns the physical properties of cancer cells
He discovered how cancer cells can vary their degree of solidity and fluidity and thus achieved a paradigmatic shift in the understanding of tumour mechanics
The German National Academy of Science Leopoldina’s Greve Prize is awarded to scientists or research teams that work at German universities
The prize is awarded every two years and honours outstanding research achievements in the natural sciences/medicine and engineering sciences
the topic is the foundations of new cancer therapies
The President of the Free and Hanseatic City of Hamburg
invites participants and guests to attend the event at the Hamburg City Hall
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Link zur Bildergalerie der Preisverleihung 2024
Greve Prize
YouTube channel of the Leopoldina (livestream on 6 December)
Deutsche Akademie der Naturforscher Leopoldina e
– German National Academy of Sciences – Jägerberg 1 | 06108 Halle (Saale) Phone: +49 (0)345 47 239 - 600 | Telefax: +49 (0)345 47 239 - 919 E-Mail: leopoldina@leopoldina.org
© 2025 Deutsche Akademie der Naturforscher Leopoldina – Nationale Akademie der Wissenschaften
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University of Rochester Medical Center scientists received $27 million to lead a large national study expected to change heart failure care for millions
This is the second $27 million award for the cardiac research team in just four months
underscoring the Medical Center’s impact on heart care
“A cornerstone of treatment for heart failure is the use of beta blockers,” said Mehmet Aktas, MD
and principal investigator (PI) of the study
“Carvedilol and metoprolol succinate are the main types of beta-blockers that are prescribed for 90 percent of people with this condition to improve survival
no one has ever studied the differences in outcomes for these two drugs in patients with heart failure who receive implantable cardioverter defibrillators (ICDs).”
This study is the first large-scale, head-to-head comparison of two heart failure drugs
aimed at improving physicians’ ability to provide optimal heart failure management for the six million people living with this disease
URMC is simultaneously conducting another major initiative that is comparing outcomes for individuals with heart failure treated with and without ICDs.
Ilan Goldenberg, MD
director of URMC’s Clinical Cardiovascular Research Center (CCRC) and co-PI with Aktas
said “heart failure is not only widespread in the US
The results of the two major heart failure trials we are conducting will be exponentially larger than the population we're studying it in
we’re not just happy with the status quo
We’re constantly working to improve outcomes
and we need data-driven decision making to do that.”
“These two large awards build upon the foundation of innovative research that has changed heart care countless times,” said David C. Linehan, MD
CEO of URMC and dean of the School of Medicine & Dentistry
“As a research university with a rich history of pivotal discoveries
our scientists answer some of the most difficult questions
and have global impact by elevating the standard of care.”
The funding comes from the Patient-Centered Outcomes Research Institute (PCORI)
nonprofit organization supporting evidence-based research needed to make better-informed healthcare decisions
“This study was selected for PCORI funding based on its scientific merit and commitment to engaging patients in conducting a major research effort on heart failure,” said PCORI Executive Director Nakela L
“The study has the potential to fill an important evidence gap relevant to a range of health care decision makers and help them better assess their care options
We look forward to following the study’s progress and working with URMC to share its results.”
the ongoing efforts at URMC to refine implantable device therapies will continue to shape modern cardiac care practices
“Securing these prestigious research funding awards positions URMC not only as a leader in advancing cardiac care for the communities we serve,” said Spencer Z. Rosero, MD
“but also serves as a catalyst for institutional growth
These trials complement our existing nationally and internationally recognized clinical research program to answer important questions
This funding will help us attract new talent
provide unparalleled training opportunities
and expand our research capabilities to create a stronger
more vibrant environment for innovation in cardiac care.”
whereas carvedilol blocks two beta and one alpha receptor
The five-year study will enroll 2,000 patients at 100 sites across the country to determine if carvedilol provides additional benefits
“Whether we find that both drugs are equally effective
it is a win for patients and providers,” said Aktas
“We’ll come away with knowledge that will inform and improve how we treat patients.”
and available at pharmacies in generic form
Aktas said that a person’s ability to switch from one to another would be effortless
from Cedars-Sinai Medical Center and Sam Sears
The initiative is supported by notable institutions
and the Association of Black Cardiologists
“I am thrilled that University of Rochester Medical Center has earned a second well-deserved $27 million competitive award
Not only will this award bolster Rochester’s status as a leader in the healthcare research field
but it will advance the Clinical Cardiovascular Research Center’s mission of saving lives and improving patient outcomes
specifically for those burdened by heart failure.”
"This award will support the highest level of cardiovascular care in our community and around the world," said Congressman Joe Morelle. "URMC's dedication to quality healthcare and leadership in medical research saves lives and supports patients and families when they need it most
I am grateful for all URMC does and I look forward to our continued work together."
*This award has been approved pending completion of a business and programmatic review by PCORI staff and issuance of a formal award contract
a young man who has dreamed of becoming a car painter since childhood
An employment project under the EU co-funded NEET PRO Grant Programme is helping him achieve this dream
I also watched car painting videos on the internet
They would use spray guns to paint the cars before polishing them with machines
The cars would end up looking so beautiful,” says Erdem
Erdem Aktaş paints machines with clear enthusiasm
He graduated from the Department of Machine Technology at a vocational high school and subsequently worked as a CNC (computer-controlled machine) technician at two different workplaces
he did not like these jobs due to the poor working conditions at both locations
He noticed the EU-funded ‘NEET Carries the Machinery Sector to the Future’ project of the Aegean Regional Chamber of Industry (EBSO) online and applied
hoping to earn certificates that would help him acquire a better job
Erdem describes the 5 weeks of classes: “The lessons differed from those I experienced in high school
I learned about machine parts and materials
plus I underwent a personal development course.”
Erdem has moved closer to achieving his childhood dream with the EU project
After observing the paint shop at the freezer factory where he had applied for a CNC internship
he knocked on the door of the general manager
The paint shop resembled car paint shops and employed the same technique
Kurtalan recounts that day: ”He said he wanted to undergo a dyeing internship with us
I asked EBSO if this was possible under the project
We gave him a chance; we were absolutely delighted with his work.”
“I told him I was very pleased with him and suggested he continue working here
He is a boy who follows instructions diligently
Having been interested in cars since childhood
he has a natural talent for this type of work
He may even become a foreman here in the future,” says Yavaş
Erdem Aktaş is currently working at the factory where he completed his internship and hopes to one day move on to his dream job of painting cars
“I think the pinnacle of this business is car painting
I would have ended up working as a CNC technician
His goal after learning the trade is to open his own car paint shop
talks about the project conducted under the EU-co-funded Labour Market Support Programme for Young People Not in Employment
“The most significant need in our industry is for qualified staff
we will continue to develop similarly effective projects to meet the human resource needs of our industry and train qualified personnel who will increase the prosperity of our country
The Head of the Delegation of the European Union to Türkiye
stresses the importance of youth participation in the labour market: “Young people not only represent the future of countries
The EU supports the empowerment of young people in Türkiye and their participation in the labour market in all areas
We are pleased to see the success of this project.”
The EU-funded project with a budget of € 325,000 aims to contribute to the employment of people aged 18 to 29 in the machinery technologies sector
Students have been selected through a cooperative effort of the Izmir Metropolitan Municipality Vocational Factory and the Turkish Employment Agency (ISKUR)
15 teachers were trained in Germany over 17 days
Training has been provided at Konak Çınarlı Vocational and Technical Anatolian High School
which renovated its laboratory as part of the project
students each receive a vocational qualification certificate
3 female and 23 male trainees were employed in EBSO member companies
Get the best experience and stay connected to your community with our Spectrum News app. Learn More
— According to The World Health Organization
an estimated 619 million people live with chronic lower back pain
about one in six are suffering from vertebrogenic pain — a lesser-known back pain caused by damage to the vertebral endplates
New technology is on top of it so busy moms like Chelsey Town can get back to their everyday lives
“We have to do laundry every day,” she laughed
Two baskets of laundry used to be a challenge
she’s lived with chronic lower back pain since 2016
sharp all the time with a burning infestation in it
And it felt like somebody was taking a screw and twisting it inside my back to where everything was feeling like it was being pulled out at the end
And that I couldn’t get back up and I was stuck there until somebody came home to help me up.”
“I deal with and manage nonoperative spine pain from the neck all the way down to the lower back
and I treat them from things as simple as acute injuries to some more chronic problems
Aktas is an interventional spine physician in the Physical Medicine and Rehabilitation Department at the University of Rochester Medical Center
He’s currently the only doctor West of Syracuse who performs the Intracept Procedure
or vertebral nerve radio frequency ablation is a minimal invasive procedure
Takes about an hour to do hour or two to do it's
We're not changing or affecting your spine
We are using heat to destroy a sensory nerve in a vertebra that is
pain generator for people with chronic low back pain
So it's a it's a great additional tool that we have
to try and help patients for a very common problem,” he explained.
There are roughly three to four of the procedures done every month
Candidates for the non-invasive procedure have lived with chronic lower back pain for quite some time
“The requirements are chronic low back pain
You've tried and failed greater than six months of conservative efforts of
And then a very characteristic MRI finding that would lead you to being a candidate for this procedure,” Dr Aktas said
Usually after sitting in the car for 10 minutes
wouldn't have to be in bed all the time with the heating pad
Patients usually see a difference in their pain levels between two and three months after the procedure
“It’s unbelievable to be able to bend down
stay down there in that position for a while and not faint or feel like I had it
because you’re in so much pain from trying to tie your son’s shoe
I’m able to go up and down the stairs without even stopping
I don't feel like I feel lightheaded or dizzy from the pain anymore.”
A lot of people who are plagued with low back pain
can really affect their activities of daily living pretty
“There's nothing better than when you you find something
And patients are getting better and returning to what they want to do.”
among other much more entertaining activities
“I didn’t feel lightheaded going down like that
And usually when I’m doing standing up for this song
“I've been standing for more than 10 minutes
I'm ready to just keep going again.' I have the energy
I originally couldn't keep up with the energy
All I wanted to do was to sit there and do nothing
or I was confined to my room and my back because I could do is lay down with a heating pad.”
She gets to enjoy raising her children again
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The University of Rochester Medical Center has been awarded funding to lead a large nationwide heart study
The cardiac research team received $27 million to jump-start a head-to-head comparison of two popular drugs used to treat heart failure
Carvedilol and metoprolol succinate are the two main drugs prescribed to patients with heart failure to improve chances of survival
But researchers said no study has been done to determine which is the better option
is leading in sudden cardiac death prevention
and this study is going to continue to pursue a legacy.”
Goldenberg is the director of URMC’s cardiovascular research center
He said the study will enroll 2,000 patients across 100 medical centers nationwide
a cardiac electrophysiologist for URMC and the lead investigator on the study
said the drugs will be evaluated on various metrics to determine which is more effective
He said those factors include time spent in the hospital
“Patients don't want to be in the hospital,” Aktas said
“So if we can demonstrate that one drug keeps patients out of the hospital
avoids the chance that they may need a shock from the defibrillator
Aktas said it could take several years before enough data is collected to make a decision
More New York State News
“If you’re looking for a little jolt to wake up
a cup of coffee provides caffeine without all the additives found in energy drinks,” says Aktas
Another great option for a natural energy boost is a smoothie with fruits and vegetables
The added proteins provide sustained energy throughout the day
and they won’t affect your sleep the way caffeine will
Some of the potential issues caused by the ingredients in energy drinks include:
UR Medicine’s Electrophysiology program offers some of the most advanced treatments available for heart rhythm disorders
Learn more
Volume 3 - 2020 | https://doi.org/10.3389/fdata.2020.608043
This article is part of the Research TopicRepresentation Learning for Graph Mining and GenerationView all 4 articles
Network embedding that encodes structural information of graphs into a low-dimensional vector space has been proven to be essential for network analysis applications
including node classification and community detection
Although recent methods show promising performance for various applications
graph embedding still has some challenges; either the huge size of graphs may hinder a direct application of the existing network embedding method to them
or they suffer compromises in accuracy from locality and noise
we propose a novel Network Embedding method
to generate embedding more efficiently or effectively
Our goal is to answer the following two questions: 1) Does the network Compression significantly boost Learning
2) Does network compression improve the quality of the representation
we propose a novel graph compression method based on the neighborhood similarity that compresses the input graph to a smaller graph with incorporating local proximity of its vertices into super-nodes; second
we employ the compressed graph for network embedding instead of the original large graph to bring down the embedding cost and also to capture the global structure of the original graph; third
we refine the embeddings from the compressed graph to the original graph
NECL is a general meta-strategy that improves the efficiency and effectiveness of many state-of-the-art graph embedding algorithms based on node proximity
Extensive experiments validate the efficiency and effectiveness of our method
which decreases embedding time and improves classification accuracy as evaluated on single and multi-label classification tasks with large real-world graphs
network embedding is converted to word embedding with considers random walk as a sequence of words
it is expected that vertices in a similar neighborhood get similar paths and hence similar representations
many of these methods are still computationally expensive and need a large amount of memory
so they are not scalable to large graphs (scalability problem)
these approaches attempt to address the non-convex optimization goal using stochastic gradient descent
hence optimization on the co-occurrence probability of the vertices can easily get stuck at a bad local minima as the result of poor initialization (initialization problem)
This may cause generating dissimilar representations for vertices within the same or similar neighborhood set
many of these methods use local information with short random walks during the embedding by ignoring the global structure in the graph
embedding on the coarsest graph is more efficient and needs far less memory that makes existing embedding methods applicable to large graphs
grouping vertices with similar characteristics in a compressed graph solves the problem of getting different representations for them
HARP (Chen et al., 2018b) addresses the initialization problem by hierarchically compressing the graph by combining nodes into super-nodes randomly
low-level representation of nodes though multi-level learning
random edge compressing may put dissimilar nodes into the same super-node making their representation similar
multi-level compressing and learning result in significant compression and embedding cost
hence HARP fails to address the scalability problem
we use graph compression to address these two problems and also the limitations of HARP
we study graph compression for the Network Embedding problem to answer these two questions:
Does the Network Compression Significantly Boost Learning
Does the Network Compression Improve the Quality of the Representation
Our main goal is to obtain more efficient and more effective network embedding models as answers to these questions
we present an extension of our first method
that is a general meta-strategy for network embedding
We propose a proximity-based graph compression method that compresses the input graph to a smaller graph with incorporating the neighborhood similarity of its vertices into super-nodes
NECL compresses the graph by merging vertices with similar neighbors into super-nodes instead of random edge merging
NECL employs the embedding of the compressed graph to obtain the embedding of the original graph
This brings down the embedding cost and captures the global structure of the original graph without losing locality kept in the super-nodes
In addition to reducing the graph’s size for embedding
we get less pairwise relationships from random walks on a smaller set of super-nodes
which generates less diverse training data for the embedding part
All these facts improve efficiency while maintaining similar or better effectiveness comparing to the baseline methods
We then project the embedding of super-nodes to the original nodes
we primarily focus on improving the efficiency of embedding methods
we may lose some local information of the nodes because of merging
we go beyond our original NECL by introducing an embedding refinement method NECL-RF
uses the compressed graph’s projected embedding to initialize the representation for the original graph embedding
Refining these initial representations aids in learning the original graph’s embedding
This provides global information of the graph into learning and also solves the different initialization problem of similar vertices
Since the compressed graph is quite small compared to the original graph
the learning time will not increase significantly
Hence similar efficiency is maintained compared to the baseline methods
we provide a richer set of experiments to evaluate NECL and NECL-RF
we only use DeepWalk and Node2vec as baseline methods for representation learning and combine them with NECL as a general meta-strategy
and present the results of all with NECL and NECL-RF
as the embedding of nodes with the original graph (C) and compressed graph (D)
node proximity is preserved in the compressed graph
nodes close in original graph embedding are also close in compressed graph embedding
Example of graph compressing on Les Miserables network (Original Network (A)
Embedding of Original Network (C) and Embedding of Compressed Network (D))
• New proximity-based graph compressing method: Based on the observation that vertices with similar neighborhood sets get similar random walks and eventually similar representation
we merge these vertices into super-nodes to get a smaller compressed graph that preserves the proximity of nodes in the original large graph
• Efficient embedding without losing effectiveness: We do random walks and embedding on the compressed graph
which is much smaller than the original graph
This method has similar effectiveness with baseline methods by preserving the global and local structure of the graph in the compressed graph
• Effective embedding without decreasing efficiency: We use the embedding obtained from the compressed graph as initial vectors for the original graph embedding
This combines the global and local structure of the graph and improves the effectiveness
Embedding of a small compressed graph does not take much time with respect to original graph embedding
so it will not increase the embedding time significantly
• Generalizable: NECL is a general meta-strategy that can be used to improve the efficiency and effectiveness of many state-of-the-art graph embedding methods
We report the results for DeepWalk Node2vec and LINE
• The paper is structured as follows
we give the necessary background for our method
we introduce our neighborhood similarity-based graph compression model by explaining our similarity measure and two different embedding methods that use the compressed graph
we present our experimental results and compare them with the baseline methods
Our final remarks are reported in Section 5
we discuss related works in the area of network embedding
We give some details of pioneer works in network embedding focusing on DeepWalk
We also explain random walk based sampling methods and multi-level network embedding approaches here
We give the formal definition of network embedding as follows
Network embedding is a mappingϕ:V→ℝd,d≪|V|which represents each vertexv∈Vas a point in a low dimensional spaceℝd
Here d is a parameter specifying the number of dimensions of our node representation
we define NS(u)⊂V as a network neighborhood of node u generated through a neighborhood sampling strategy S
We seek to optimize the following objective function
which maximizes the log-probability of observing a network neighborhood NS(u) for a node u conditioned on its representation
There is an assumption that the conditional independence of vertices will ignore the vertex ordering in the neighborhood sampling to make the optimization problem tractable
the likelihood is factorized by assuming that the likelihood of observing a neighborhood node is independent of observing any other neighborhood node given the representation of the source
The conditional likelihood of every source-neighborhood node pair is modeled as a softmax unit parametrized by a dot product of their features
It is too expensive to compute the summation over all vertices for large networks, so we approximate it using negative sampling (Mikolov et al., 2013b). We optimize Equation 1 using stochastic gradient ascent over the model parameters defining the embedding ϕ
The neighborhoods NS(u) are not restricted to just immediate neighbors but can have vastly different structures depending on the sampling strategy S
There are many possible neighborhood sampling strategies for vertices as a form of local search
Different neighborhoods coming from different strategies result in different learned feature representations
random walk based methods are used to capture the structural relationships of vertices
They maximize the co-occurrence probability of subsequent vertices within a fixed-length window of random walks to preserve higher-order proximity between vertices
networks are represented as a collection of vertex sequence
we take a deeper look at the network neighborhood sampling strategy based on random walks and the proximity captured by random walks
The co-occurrence probability of node pairs depends on the transition probabilities of vertices
we define adjacency matrix A that is symmetric for undirected graphs
we have Aij=1 if and only if there exists an edge from vi to vj
as Dij=∑kAik if i=j
transition probability from one node to another depends on the degree of the vertices
The probability of leaving a node from one of its edges is split uniformly among the edges
We define this one step transition probability as T: T=D−1A where Tij is the probability of a transition from vertex vi to vertex vj within one step
related vertices in the network are hierarchically combined into super-nodes at varying levels of coarseness
After learning the embedding of the coarsened network with a state-of-the-art graph embedding method
the learned embedding is used as an initial value for the next level
The initialization with the embedding of the coarsened network improves the performance of the state-of-the-art methods
One of the limitations of this method is that multi-level compressing and learning results in significant compression and embedding cost
Random edge compressing may put dissimilar nodes into the same super-node that makes their representation similar
Then they generate different meta-graph from the tree and apply the baseline method i.e.
After getting the embedding from different meta-graph
they combine these embeddings to find the final embedding
They use a parameter to regulate the weights of different embedding for combining
Our approach differs from these by applying similarity-based compressing to preserve the local information
all of these approaches apply hierarchical compressing that may take more time
but we apply single level compressing and use it to get the original graph embedding
NECL uses the graph coarsening to capture the local structure of the network without a hierarchical manner to improve the efficiency of the random walk based state-of-the-art methods
While a desirable network embedding method for real-world networks should preserve the local proximity between vertices and the global structure of the graph
it should also be scalable for large networks
This section presents our novel network embedding models
We extend the idea of the graph compressing layout to network representation learning methods
we explain our proximity-based compression method and how we combine compression with network embedding
simple graph G=(VG;EG) where VG is the set of vertices
and EG⊆{VG×VG} is the set of edges
The set of neighbors for a given vertex v∈VG is denoted as NG(v)
where NG(v)={u|u∈VG:(u,v)∈EG}
A compressed graph of a given graphG=(VG;EG)is represented asCG=(S;M)whereS=(VS;ES)is the graph summary with super-nodesVSand super-edgesESand M is a mapping from each node v in $V_G$ to its super-node inVS
A super-edgeE=(Vi;Vj)inESrepresents the set of all edges between vertices in the super-nodesViandVj
The critical problem for graph compressing with preserving local structures of the graph is to identify vertices that have similar neighborhoods accurately
so they are more likely to have similar representation
we discuss how to select vertices to merge into super-nodes
The motivation of our method is that if two vertices have many common neighbors
many embedding algorithms that preserve local neighborhood information will give similar representations to them
This comes from our following observation that if two vertices
they also have similar transition probabilities to other vertices
Ti=Ai*Dii1 and Tj=Aj*Djj1
Hence they have similar neighborhoods and get similar neighborhood sets from random walks
they get similar representations from the learning process
For example, in the toy graph in Figure 2
the neighbor sets of the nodes a and b are the same
their transition probabilities to the other neighbor vertices are also the same
p(ni|a)=p(ni|b)=1/4 for all i∈{1,2,3,4}
Starting on either a or b yields the same or very similar walks
so they have the same or similar representation
instead of walking and learning representations for both a and b
it is enough to learn one for both of them
we can merge this node pair (a,b) into one super-node ab
Transition probabilities of this super-node to neighbors of a and b are still the same with a and b
p(ni|ab)=1/4 for all i∈{1,2,3,4}
When we obtain the representation of the super-node ab
we can project it as the representation of each node in this pair
Merging these vertices keeps the preservation of the first and second-order proximity
this does not affect the results of walking and learning
(a,b) are merged into super-node ab connected to the neighbors of both (a,b)
Furthermore, compressing may change the transition probability of neighbors of compressed vertices since the number of their neighbor decrease. As a result, the transition probability of each neighbor changes. For example, in the toy graph in Figure 2A
while the transition probability from n1 to its neighbors is 1|N(n1)|
it becomes 1|N(n1)|−1 since the number of neighbors decrease by one
we assign weights to edges of super-nodes based on the number of merged edges within the compression
the super-edge between super-node ab and n1 includes two edges which are (a,n1) and (b,n1)
the weight of the super-edge (ab,n1) should be 2
it is not expected to have too many vertices sharing exactly same neighborhood
such as node classification and graph clustering
if two vertices share many common neighbors
they are expected to be in the same class or cluster
although their neighbor sets are not completely the same
we expect to have similar feature vectors for the vertices in the same class/cluster after embedding
we can also apply the same merge operation on these vertices
Following the same idea in the example above
if neighbors of two vertices are similar (but not exactly the same)
we can merge them into a super-node and learn one representation for all
While we can project this super-node embedding to original vertices and use the same representation for both
we can also update them in the refinement phase to embed the difference of them into their representation
we define our graph compressing algorithm formally
if a set of vertices n1,n2,…,nr in VG have similar neighbors
we merge these vertices into one super-node n12...r to get a smaller compressed graph G′(VG′,EG′)
we define the neighborhood similarity based on the transition probability
Before defining the neighborhood similarity
we first show that cosine similarity between transition probabilities of two vertices u and v
are determined by the number of their common neighbors
Let T be the 1-step transition probability matrix of vertices V in a graph G and let u,v∈V
Let N(u) and N(v) be the neighborhood sets of u and v and Tu and Tv be the transition probability vectors from u and v to other vertices
Then the similarity between Tu and Tv is proportional to the number of common neighbors
The cosine similarity between Tu and Tv is defined by
we have Tu=Au|N(u)| and Tv=Av|N(v)|
Hence, if we plug in these into Equation 1
we see that the similarity of transition probabilities from two vertices to other vertices depends on the similarity of their neighbors
we define the neighborhood similarity between two vertices as follows
Definition 3 (Neighborhood similarity) Given a graph G
the neighborhood similarity between two vertices u,v is given by
In order to normalize the effect of high degree vertices
we divide the number of common neighbors by degree of vertices
The neighborhood similarity is between 0 and 1
where it is 0 when two vertices have no common neighbor and one when both have the same neighbors
we merge vertices whose similarity value is higher than a given threshold value
The neighborhood similarity-based graph compressing algorithm is given in Algorithm 1
It is clear that the vertices with a nonzero neighborhood similarity are 2-step neighbors
we do not need to compute the similarity between all pairs of vertices
we just need to compute the similarity between vertices and their neighbors’ neighbors
we compute the similarity between v and each k as neighbors of neighbors (line 3–10)
we check the similarity value of all pairs (u
k) in the list and if it is higher than the given threshold λ (line 12)
we merge u and k into a super-node su,k (line 13)
Then we delete edges of u and k and add edges between neighbors of u and k and the new super-node su,k (line 17–24)
We assign weights to the edges of super-nodes based on the number of merged edges within the compression
Threshold λ decides the trade-off between efficiency and effectiveness
we may merge some dissimilar vertices as well
which may result in an increase in efficiency but cause a decrease in accuracy
Note that since we use original neighborhood similarity
the order of merging does not affect the result
so we randomly select a node and check neighbors for compression
one super-node may include more than two vertices of the original graph
if the similarity between the vertices x and y
we merge x and y in sx,y and then we merge sx,y and z into sx,y,z
we check whether the node y is merged with another node and if so
we get the super-node of the original node x
Our NECL framework is adaptive with any embedding method which preserves the neighborhood proximity of nodes
We get the embedding for the original graph in two ways
Our main goal in this section is to improve the efficiency of the embedding problem while maintaining similar effectiveness with the baseline methods
we embed the compressed graph and employ this embedding for the original graph embedding
NECL: Network Embedding on Compressed Graph
after getting the weighted compressed graph S (line 1)
we obtain the representation of super-nodes VS as ϕs in the compressed graph with the provided network embedding algorithm (line 2)
We apply any random walk based representation learning algorithm on the compressed graph
We just need to apply weighted random walks to consider the edge weights
As the size of the compressed graph is smaller than the original graph
it is more efficient to get embeddings of super-nodes than single vertices
we assign the embedding of super-nodes to vertices according to the mapping M obtained from the compression (line 3–7)
While we may lose some local information with assigning the same representation to multiple vertices
we may not need to get small differences between nodes for many applications
Our main goal in this section is to improve the effectiveness of the embedding problem while still maintaining similar efficiency with the baseline methods
we employ the embedding of the compressed graph as initialization to the original graph embedding and refine it
the original graph embedding is obtained in line eight by refining the compressed graph embedding given as the initial representation
We do our experimental studies to compare our methods with different models in terms of efficiency and effectiveness
We evaluate the quality of embeddings through challenging multi-class and multi-label classification tasks on four popular real-world graph datasets
we present our model’s performance based on different parameters
we compare the results of our models with the results of HARP
Datasets: We consider four real-world graphs1
which have been widely adopted in the network embedding studies
each node in the datasets has a single-label from multi-class values
Baseline methods: To demonstrate that our methods can work with different graph embedding methods
we use three popular graph embedding methods
We combine each baseline method with our methods and compare their performance
We give a brief explanation of the baseline methods in Section 2
which uses a compressed graph embedding as the original graph embedding
which uses the compressed graph embedding as the initial vector for original graph embedding and refine it with the original graph
we set the following parameters: the number of random walks γ
window size w for the Skip-gram model and representation size d
The parameter setting for all models is γ=40
The initial learning rate and final learning rate are set to 0.025 and 0.001 respectively in all models
Representation size for LINE is d=64 for all model
after getting embeddings for nodes in the graph
we use these embeddings as the features of the nodes
we train a classifier using these features
we randomly sample a certain portion of labeled vertices from the graph and use the rest of the vertices as the test data
we vary our training ratio from 1% to 50% on the Citeseer
and DBLP datasets and from 10% to 80% for BlogCatalog
We use larger portion training data for the BlogCatalog dataset because the number of class labels of BlogCatalog is about ten times other graphs
Performance comparisons of NECL with baseline methods (BL)
Compression ratio with the similarity threshold λ=0.5
Detailed classification results on Citeseer
Detailed classification results on BlogCatalog
Run time analyses for different similarity threshold values λ (Citeseer (A)
The ratio of vertices/edges of the compressed graphs to that of the original graphs
Gain on baseline methods: For all datasets, we present macro F1 and micro F1 scores for single and multi-label classification tasks and embedding time in Table 1 and compression ratio for edge and vertices in Table 2. We use 5% training ratio of labeled vertices for Citeseer, Wiki, and DBLP and 40% training ratio for BlogCatalog. As we see from Table 1
there is a significant gain on macro and micro F1 in addition to gain on efficiency on Citeseer
while there is a significant gain on total embedding time as efficiency
there is no (significant) difference between NECL and baseline methods on macro F1 and micro F1 For LINE
we have a higher gain on time for all datasets
For DBLP, gains of embedding time are much higher than other datasets. On the other hand, for BlogCatalog, gains of embedding times are less with respect to other datasets. As we see from the Tables 1, 2
the gain of embedding time depends on the compression ratio of the number of edges and vertices
the number of vertices and edges for DBLP decrease from 27,199 to 8,824 (70%) and from 13,3664 to 32,984 (75%)
embedding becomes more efficient with better or same accuracy
the compression ratio is lower than the others
so the neighborhood similarity is higher and this results in more compression
vertices have less common neighbors and so a lower similarity
We can conclude that while the gain in the effectiveness of our method depends on the baseline method
the gain in efficiency of our method depends on the characteristics of the dataset
Detailed Analyses: We compare the performance of NECL framework for different similarity threshold values λ that results in different compression ratios with the performance of the baseline methods. Macro F1 and micro F1 scores on different datasets are given on Figures 3–6 for Citeseer
We observe that for λ>0.45
and micro F1 scores for NECL are similar with or higher than baseline methods across all datasets except Citeseer
the quality of embedding decreases dramatically and so does the accuracy of classification
The results for Citeseer depend on the baseline methods
While λ=0.45 gives better accuracy for DeepWalk and Node2vec
In addition to the macro F1 and micro F1 scores, we also report the embedding time and compression ratio for different similarity threshold values λ in Figures 7, 8
we see that NECL takes significantly less time compared to the baseline method
and we get a smaller compressed graph and so the embedding time decreases
As BlogCatalog has a lower compassion ratio
the embedding time is less for all three baseline methods
We observe that there is a linear relation between λ and the number of vertices and edges until λ=0.5
graph sizes change dramatically for smaller λ for Citeseer
but the decrease is slow for BlogCatalog until λ=0.7
One of the reasons for this situation in BlogCatalog is that the sizes of the neighbor sets for some vertices are very large
and it is not easy to get higher similarity for a larger set
10 common neighbors can be considered to have a higher similarity
two vertices with 150 edges should have 100 common neighbors to get the same similarity value
we observe that smaller λ results in smaller compressed graph
we start to lose critical information about the graph
we refine our results with our second method
Detailed comparisons of classification results on Citeseer
Detailed comparisons of classification results on Wiki
Detailed comparisons of classification results on DBLP
Detailed comparisons of classification results on BlogCatalog
we see that NECL or NECL-RF gives the highest macro F1 and micro F1 scores for datasets with all baseline methods except for LINE on Wiki
NECL or NECL-RF gives the highest accuracy for all the three baseline models
NECL-RF significantly improves the quality of the embedding for all datasets except Citeseer with Node2vec and Wiki with LINE
While HARP has higher accuracy than baseline methods
it does multiple levels of iteration of graph coarsening and representation learning
Embedding time for NECL-RF is the total of embedding time for the original graph and compressed graph
the compressed graph is much smaller than an original graph
so the learning time for the compressed graph is significantly less compare to the baseline method
complexity does not increase significantly as in HARP
we get similar or better effectiveness than HARP with less time complexity
Detailed comparisons between all methods using different portions of labeled vertices as training data are presented in Figures 9–12
NECL and NECL-RF give the highest accuracy compared to other models or give better results than the baseline models
The reason for this decrease might be that
learning a global structure with compressed data
which also includes a local structure in the super-nodes
So when we relearn and update the embedding of the compressed graph
it deteriorates the accuracy of the classification task
our method has a better improvement on DeepWalk
The reason is that while Node2vec and LINE may learn higher-order proximity
regular random walk in DeepWalk may not capture higher-order proximity
We present a novel method for network embedding that preserves the local and global structure of the network
To capture the global structure and accelerate the efficiency of state-of-the-art methods
we introduce a neighborhood similarity-based graph compression method
We combine the vertices with common neighbors into super-node
Then we apply network representation learning on the compressed graph so that we can reduce the run time and also capture the global structure
we project the embedding of super-nodes to original nodes without refinement
we relearn the representation of the network with assigning the super-nodes embedding to its’ original vertices as initial features and update this using the baseline method
we combine the local structure with the global structure of the network
While the first method provides efficiency with learning on the small compressed graph
the second method provides effectiveness with incorporating global information into embedding with the compressed graph
NECL and NECL-RF are a general meta-strategies that can be used to improve the efficiency and effectiveness of many state-of-the-art graph embedding method
We use three popular state-of-the-art network embedding methods DeepWalk
Experimental results on various real-world graph show the effectiveness and efficiency of our methods on challenging multi-label and multi-class classification tasks for all these three baseline methods
The future work of our NECL and NECL-RF could be using different refinement methods of graph embedding
We can apply different neural network models without relearning the whole network to refine the embedding which we get from the compressed graph
Another extension could be done by using different clustering methods or similarity measurements to compressed the graph and use other baseline methods
The original contributions presented in the study are included in the article/Supplementary Material
further inquiries can be directed to the corresponding authors
Conceived and designed the experiments: MI and EA Performed the experiments: MI
This work was partially done by the author Ginger Johnson while she attended the Big Data Analytics REU program at Oklahoma State University supported by the National Science Foundation under Grant No
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest
The content of this manuscript has been presented in part at the Big Data conference (Akbas and Aktas, 2019a). Earlier version of this manuscript has been released as a pre-print at Arxiv (Akbas and Aktas, 2019b)
“Towards compressing web graphs,” in Proceedings of data compression conference Snowbird
Google Scholar
“Attributed graph clustering: an attribute-aware graph embedding approach,” in Proceedings of the 2017 IEEE/ACM international conference on advances in social networks analysis and mining
Google Scholar
“Network embedding: on compression and learning,” in IEEE international conference on Big data (Big data)
Google Scholar
Network embedding: on compression and learning
“Graph clustering based on attribute-aware graph embedding,” in From security to community detection in social networking platforms (Springer International Publishing)
CrossRef Full Text | Google Scholar
Ayan Kumar Bhowmick
“Louvainne: hierarchical louvain method for high quality and scalable network embedding,” in WSDM
CrossRef Full Text | Google Scholar
“Laplacian eigenmaps and spectral techniques for embedding and clustering,” in Proceedings of the 14th international conference on neural information processing systems: natural and synthetic
Google Scholar
A comprehensive survey of graph embedding: problems
CrossRef Full Text | Google Scholar
“Grarep: learning graph representations with global structural information,” in Proceedings of the CIKM’15
Google Scholar
“Deep neural networks for learning graph representations,” in Thirtieth AAAI conference on artificial intelligence
Google Scholar
Google Scholar
“Harp: hierarchical representation learning for networks,” in Thirty-second AAAI Conference on artificial intelligence New Orleans
Google Scholar
“Graphzoom: a multi-level spectral approach for accurate and scalable graph embedding,” in ICLR 2020
Google Scholar
“A survey on network embedding,” in IEEE transactions on knowledge and data engineering
Google Scholar
Liblinear: a library for large linear classification
CrossRef Full Text | Google Scholar
“Compressing network graphs,” in Proceedings of the LinkKDD workshop at the KDD’10
Google Scholar
CrossRef Full Text | Google Scholar
“node2vec: scalable feature learning for networks,” in KDD proceedings of the 22nd ACM SIGKDD (San Francisco
Google Scholar
Representation learning on graphs: methods and applications
Google Scholar
Mile: a multi-level framework for scalable graph embedding
Google Scholar
“Efficient estimation of word representations in vector space,” in Proceedings of workshop at ICLR
Google Scholar
“Distributed representations of words and phrases and their compositionality,” in Advances in neural information processing systems
Google Scholar
“Learning convolutional neural networks for graphs,” in Proceedings of the ICML’16
Google Scholar
“Asymmetric transitivity preserving graph embedding,” in Proceedings of the KDD’16 (New York
Google Scholar
“Deepwalk: online learning of social representations,” in Proceedings of the SIGKDD’14 (New York city
Google Scholar
“Network embedding as matrix factorization: unifying deepwalk
and node2vec,” in Proceedings of the WSDM’18
Google Scholar
Nonlinear dimensionality reduction by locally linear embedding
PubMed Abstract | CrossRef Full Text | Google Scholar
“Compressing the graph structure of the web,” in Proceedings of the data compression conference
Google Scholar
“Atp: directed graph embedding with asymmetric transitivity preservation
CrossRef Full Text | Google Scholar
“Line: large-scale information network embedding,” in Proceedings of the WWW’15
Google Scholar
“Verse: versatile graph embeddings from similarity measures,” in Proceedings of the WWW’18
Google Scholar
“Graphgan: graph representation learning with generative adversarial nets,” in Thirty-Second AAAI Conference on Artificial Intelligence
Google Scholar
CrossRef Full Text | Google Scholar
“Hierarchical graph representation learning with differentiable pooling,” in Proceedings of the NIPS’18
Google Scholar
“Network representation learning: a survey,” in IEEE Transactions on Big Data
Google Scholar
Akbas E and Aktas ME (2021) Proximity-Based Compression for Network Embedding
Received: 18 September 2020; Accepted: 07 December 2020;Published: 26 January 2021
Copyright © 2021 Islam, Tanvir, Johnson, Akbas and Aktas. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY)
distribution or reproduction in other forums is permitted
provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited
in accordance with accepted academic practice
distribution or reproduction is permitted which does not comply with these terms
*Correspondence: Muhammad Ifte Islam, aWZ0ZS5pc2xhbUBva3N0YXRlLmVkdQ==; Esra Akbas, ZWFrYmFzQG9rc3RhdGUuZWR1
Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations
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As an intern, Michael, who transitioned from Liberal Studies to the College of Arts and Science this semester, facilitated consumer fragrance tests and organized resulting data for presentations to retail clients.
“I think that it would be cool to take my passion for connecting with other people who are passionate about certain things and apply that to fragrance because it is similar to music,” Michael says. “It's just people coming together about something that they're passionate about, which is a lot like music.”
has been selected as an American Society of Cytopathology (ASC) Partners/BIO Ventures for Global Health (BVGH) 2023 Global Health Ambassador
Assistant Professor of Pathology at Yale School of Medicine and an Affiliated Faculty of the Yale Institute for Global Health
BVGH has partnered with experts and key opinion leaders from industry
and NGOs to target the growing cancer crisis in Africa
The crisis can be attributed to many complex and connected factors
including but not limited to delayed and/or incomplete diagnoses
Much of sub-Saharan Africa lacks the diagnostic pathology capacity to needed accurately diagnose and stage cancers to ensure appropriate treatments are prescribed
Patients suffer delays due to the lack of efficient and reliable pathology services
a cytopathologist and a general surgical pathologist whose interests include quality in healthcare and digital pathology
“I have always been interested in doing meaningful and impactful work and serving the big picture,” she said
“That interest and purpose led me into getting a master’s in public health and becoming a cytopathologist and getting trained on performing ultrasound guided fine needle aspirations
I am thrilled to have found an opportunity to realize these goals
Mr Matulic and Mr Aktas have honed their craft in the region
starting their career together 24 years ago and running a leading business since 2008
They have partnered with Ms Jarvis of Ray White North Ryde | Macquarie Park
have combined to create Ray White The Ryde Group
“As we were growing we realised that we needed to make a change
to take our business to the next level,” Mr Aktas said
“Ray White is the highest performing agency in the country
and their systems cannot be competed with.”
Mr Matulic said Ryde was a hub of activity and connectivity to the rest of Sydney
“We are situated in a prime location for all the infrastructure and development happening around the city and in Western Sydney,” he said
“We have connectivity to all motorways
and the construction of the new light rail which will pass straight through us connecting Parramatta and Olympic Park
“It is a rapidly changing and growing area; we have lots of young families setting up here who can’t afford the Inner West
and plenty of first home buyers and investors chasing the apartments.”
Ms Jarvis said the two established offices joining forces would lead to outstanding customer service for the region
“If you look at the group partnerships that have been established all around Sydney and the success they have achieved
it is clear why we have joined forces with another fantastic business,” she said
The team has strong rent rolls and property management departments
Mr Aktas said that by taking on a larger area
there is huge potential to grow the team even further
“We want to sustain and exceed the level of service we have offered the community for 24 years; the relationships we have built here are very dear to us,” he said
We opened our office right in the middle of the GFC; we knew that we had the skills and connections to sustain ourselves
sustainable agency for the Ryde area for years to come.”
Ray White NSW Chief Executive Officer, Tim Snell
said he was thrilled to watch another excellent partnership thrive within the Ray White family
“It is a testament to our group when seasoned and well-respected businesses choose to join forces with our fantastic operators like Kerry Jarvis,” Mr Snell said
“Operators like David Aktas and Nick Matulic are the dynamic and ambitious leaders that we strive to produce in the Ray White New South Wales network
“I see a bright future ahead for the super-team that is Ray White The Ryde Group.”
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Day one of the Tallinn European Open 2024 showed promise for the young hopefuls of Estonia Judo
The Italian athlete simply couldn’t keep up with the onslaught of attacks and instead ceded three shidos
It will be the third time Weling and Heyder have met in competition this year
Germany were guaranteed a place in the -63kg final as Hanna SEDLMAIR (GER) and Viktoria FOLGER (GER) went head to head in the first semi final. It was a tough one for the women, but in the end, Sedlmair was the winner based on the accumulation of shidos for Folger. Sedlmair will now meet Kamile NALBAT (NED) in the final. Nalbat baited Carlotta AVANZATO (ITA) in their semi final
and executed a waza ari-scoring ura nage to clinch her win
but Chernov was met with the stone wall of Bouda
who used his opponents momentum to throw him
The German theme continued in to the -73kg category
with an all-German semi final between Jano RUEBO (GER) Lennard SLAMBERGER (GER) it was hard fought
it was a shido conclusion with Ruebo taking the place in the final
Chusniddin KARIMOV (CZE) had been explosive throughout the preliminaries and he wasn’t about to give up his place in the final
but succumbed to a huge o soto gari attack from Karimov that earned him a contest-winning waza ari
Not only have Germany secured some final spots, but regardless of the final result in the -78kg category, we will be hearing the German national anthem. First up, Migle Julija DUDENAITE (LTU) suffered defeat at the hands of Julie HOELTERHOFF (GER)
Hoelterhoff managed to take the win with a switch
she changed direction to score ippon with o uchi gari
it didn’t go so swiftly for Mathilde Sophie NIEMEYER (GER)
however she persevered against Paulina DZIOPA (POL) and caught her with a stunning de ashi barai
candidate Buse Aktas draws on her artistic background and craftsmanship experience as she researches soft robotic structures that vary in stiffness
painstakingly stitched and woven together from stiff strands of grass
seems to be the polar opposite of a sophisticated
But Buse Aktas sees a number of similarities between the age-old tool and ultra-modern device
And she would know; Aktas, a mechanical engineering Ph.D. candidate at the Harvard John A. Paulson School of Engineering and Applied Sciences, spent several years as a broom maker’s apprentice in her native Turkey before beginning soft robotics research in the lab of Rob Howe
Abbot and James Lawrence Professor of Engineering
is like an extended apprenticeship,” Aktas said
“I like learning things and putting that knowledge into a bigger perspective
Aktas works on a handcrafted broom in the workshop of master broom maker Niyazi Usta
Aktas didn’t intend to become a broom maker
she enjoyed drawing and making sculptures from found materials
“I became an engineer because my dad is a really big guy,” she said
“He never fit behind the TV or into tight spaces like that
While she found it difficult to leave Turkey
Aktas enrolled at Princeton University and majored in mechanical engineering
but became so disillusioned while studying engineering theory that she planned on being a full-time artist
Aktas got her first taste of research in a microfluidics lab
but chose a more “people-oriented” project for her thesis
She developed a device to help individuals with physical and mental disabilities build objects on an assembly line at an Easter Seals workshop
She also drew on her sculpture background by hosting hands-on art workshops aimed at redesigning the workplace to give employees more agency and ownership within their work experience
Aktas works with high school students during a workshop where they completed a design challenge using jamming
I learned that people have very different ways of expressing themselves,” she said
it is important to understand what the issue is
and give agency to members of that community
rather than just trying to do something for them.”
She enjoyed seeing how her artistic skills could make an impact
and returned to Turkey with plans to be an Istanbul-based sculptor
she had the opportunity to complete mini-apprenticeships with a Turkish saddle maker
she launched an artistic collaboration with the broom maker while completing a master’s degree in design and cultural heritage at Istanbul’s Kadir Has University
Aktas worked closely with the master broom maker
absorbing each detail of the craft and then creating an exhibition of 40 sculptures that used only broom making materials and techniques
“I felt this real sense of urgency to protect these dying crafts,” she said
“These are types of knowledge that you can’t write down
You can only transfer it over time through experiential learning
Knowledge can’t just be limited to journal articles
only the person who has the knowledge has the power
Working 12 hours a day in a broom maker’s studio
taught Aktas much more than stretching and weaving techniques
“It takes a lot of time to learn something,” she said
“It is very important to respect the people who are giving you that knowledge
but you also need to find the right way to challenge them
to be able to internalize it and make it your own.”
Aktas sets up for her broom art exhibition
Aktas’ passion for knowledge inspired her to pursue a Ph.D
She chose Howe’s lab so she could keep working with her hands while pursuing a wide array of projects
she is utilizing jamming techniques to develop soft robotic structures that vary in stiffness
Jamming enables a researcher to change the mechanical properties of a material drastically by squeezing it tightly
Aktas and her colleagues are modeling how jamming structures could be used to bridge the gap between soft and rigid robots
Her work has applications in everything from medical devices
such as wrist braces that help rehab patients
to manipulators that can grasp items in a warehouse
“The biggest challenge comes from the innumerable facets involved in jamming
I can get lost in my own work and forget that there is this whole world of robotics applications we are trying to reach,” she said
She especially enjoys how well the field lends itself to outreach
Jamming is an ideal method to teach children mechanics because they can see and touch devices that clearly exhibit theoretical principles
In addition to mentoring robotics teams and LEGO leagues
Aktas has overseen design challenges for high school students and offered STEM workshops at science fairs
She plans to make the development and scientific study of STEM workshops
Aktas still considers herself as much an artist as an engineer
She thinks of research as a sort of performance art
and constantly explores new ways to share her work
her lab presentations incorporate storytelling
“I’m starting to ask my own research questions
and I was feeling a bit apprehensive about it,” she said
I just hadn’t done that in a scientific context
My background in art helps me to be braver.”
Aktas draws on her artistic background when developing research questions
Aktas hopes to continue working at the intersection of art and science after completing her Ph.D
She intends to become an engineering professor
and wants to bring engineering and art students into her lab to work on projects together
all goes back to the countless hours she spent in that broom maker’s dusty workshop
“I don’t want to be a great researcher with lots of cited papers for my own sake; I want that because it would grant me the capacity to give freedom to my students
because he is such an established researcher
and he can also expose me to communities in which I can share my work and get useful feedback
And that is because of how hard he has been working over the years,” she said
so I can give my students a safe place to explore
Yasemin Aktas is an IP litigator and Turkish trademark and patent attorney who has 12 years’ experience practising IP law in Turkey
She advises on a wide range of IP issues and transactions regarding trademarks
working with foreign and multinational clients from various industries in implementing IP protection
litigation and enforcement strategies and portfolio management
Ms Aktas has wide experience in building anticounterfeiting strategies
She is a member of the INTA Anticounterfeiting Committee
Marques Dispute Resolution Team and ECTA Publication Committee and has been selected as a member of the IP Experts Group to assist the International Anti-counterfeiting Coalition IP Advisory Board
Ms Aktas has been ranked among the top tier IP professionals in Turkey by the WTR 1000 and the IAM Patent 1000 and has been listed as Recommended Lawyer by The Legal 500
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Tolga Aktas is a UK-based conservation biologist who participated in Black Birders Week
there weren’t many outlets showing diversity
so I was only able to be inspired by white conservationists and naturalists,” Aktas said
“The Black Birders Week movement allowed me to see that there are many Black wildlife heroes out there
It reassures me that everybody can make a difference towards our planet.” Aktas’s interest in becoming a conservation biologist
storyteller and explorer was not born overnight
a village in Northern Cyprus where his extended family lives
Aktas spent the season exploring the natural wonder of the region
always studying the animals that call the island home
Aktas touched on the outdoor experiences that led him on his journey to become a conservation biologist
and how he would like to empower others to go after their dreams
Tolga Aktas exploring the natural landscapes in the Cotswolds
Q: What experiences sparked your passion for the natural world
Tolga Aktas (TA): It all started with following my uncle at dawn and dusk as he took his sheep and goats out to graze near the mountains in Northern Cyprus
I had the opportunity to travel between Northern Cyprus and Jamaica a lot because my parents were from these countries
This allowed me to discover different habitats
ecosystems and fundamentally the wildlife that were native to these countries
My favorite memories were created in Northern Cyprus during my upbringing
as I spent a lot of time away from my cousins in the fields near our homes
Living in a village there were loads of animals running around
I was always in awe with what I saw around me
It really gave me a true appreciation of the natural world
even to a point that I traded the use of my Gameboy Advance to my cousin so I could get my hands on a chicken egg
I think I was around five or six when I first had a sense of the animals and environment around me
and this later led to being exposed to wildlife documentaries where the late Steve Irwin and Sir David Attenborough changed everything for me
My journey was a bit scrambled at first as I had to go through a career change from electrical engineering to be where I am today
but when I was younger I didn’t have the resources to push me to do what I am doing today
I never saw a Black person presenting wildlife programs or doing other kinds of wildlife work
I thought it was a lost cause back then and after I left secondary school with bad grades
I settled with anything that would get me by and this is where I got into electrical engineering
Q: So how did you make it in the wildlife conservation world
It has been a wacky rollercoaster ride with how I got into the conservation world to be honest
it seemed like it lasted forever when I was first started out
But it has been totally worth it and wouldn’t trade all of my experiences for anything in the world
I owe a lot to watching wildlife documentaries when I was younger
because if it wasn’t for those then I probably wouldn’t have embarked on all of the experiences which led me to the position where I am today
Once I broke into the wildlife conservation field
I knew that I had achieved some form of success in my life
It has always been a dream to explore the natural world
to witness all of the wildlife it has and the wild spaces that we all share
It still hasn’t hit me that I am finally living my dream
but I am grateful for everything that has been presented to me
Tolga Aktas attaching a new radio tracking collar to a lion in South Africa
Q: What impact has Black Birders Week had on you
TA: Black Birders Week was absolutely fantastic to watch develop
I knew it was a topic that was here to stay and make an impact
Before I knew it there were brothers and sisters from all races standing up for each other and what is right
It was so nice to be put in touch with the many amazing people that work in STEM fields
I am very excited and thrilled to know that people of all races are using their voices to educate and contribute to making a positive change towards our planet
I look forward to seeing what the Black AF in STEM group will achieve next
I think it would’ve meant everything to have been exposed to a scenario like this when I was a kid
It would’ve brought things closer to home and I would’ve had more diversity in the people I call my heroes
things will be different for the generations that are coming forth now
who have the exposure to a much diverse community of nature enthusiasts and people that work in STEM fields
We need to show them that jobs in these fields are achievable for them too
no matter what color their skin is or where they’re from
a species native to Africa and small parts of Arabia
I was really moved to see all these different groups forming a community and all supporting each other
Even though we are all scattered geographically around the world
and the discussion about racism was circulating everywhere
When I saw that video of Christian Cooper and Amy Cooper in Central Park
it was really a disturbing experience and I think everybody that watched it must have felt as threatened as Christian Cooper
I recall watching the video clip with my jaw open
thinking if such an experience happened to me
I don’t know what I would have done or if I would have handled it as well as Christian did
It’s very worrying that there are people out there that feel the need to see beautiful and innocent people as a threat
Tolga Aktas feeding wolves at a sanctuary in Berkshire
Q: During Black Birders Week there were a lot of discussions about racism and interactions with the police
have you ever experienced any challenges or dangers when conducting fieldwork
TA: I have been very fortunate to not have experienced any racism during my times conducting fieldwork
that doesn’t necessarily mean that the issue isn’t present as I was probably just at the right place at the right time
I do pray that I don’t have to experience something like this
or that anybody else does as it could really ruin an experience that means the world to them or took a very long time to achieve
the world witnessed many advocates standing up for those that had fallen due to racism
whether it was modern tragedies or tragedies in the distant past
I just hope that these same people stand with us for years to come
Rest in peace to every angel and solider that has fallen and lost their lives to racism
It has been going on for too long and it is a shame that it still occurs today
Tolga Aktas adjusting a radio tracking collar onto an African wild dog
Q: As a conservation biologist who focuses on canids
how would you like to use your skills to further the initiative
TA: A lot of people in STEM fields were inspired by a white person
and hopefully through Black Birders Week people are able to be inspired by STEM professionals from all other races too
If you have a dream and believe that your story and voice can make a difference towards the natural world
The biggest struggle is overcoming the doubt in ourselves and finding the courage to accomplish our goals
They’re doing amazing work over in South Africa
protecting endangered animals like the wild dogs
After spending a month with the team at Wildlife ACT
tracking wild dogs and lions from dawn and dusk
I knew in my heart that I would be coming the following year to study these species for my university thesis
Tolga Aktas tracking and monitoring for African wild dogs in South Africa
and everybody that knows me knows this very well
I think anybody that hasn’t seen the species before in the wild or in captivity and eventually sees them for the first time almost certainly becomes an advocate in protecting them
my attitude was to focus on a particular species and build my career around it
This was when I didn’t know much about ecology and biodiversity and its importance in ecosystems
you then begin to appreciate every species and the habitats that support them
and realize that you have to focus on the bigger picture
As our species continue to populate the world
and space becomes limited alongside the natural world
my biggest mission now is to build my career around a world where we can co-exist with every species
Tolga Aktas exploring the ancient woodland of Epping Forest
Kara Jamie Norton (@whereskara) is an independent science journalist based in New York City
© 2025
is a 501(c)(3) not-for-profit organization
An Anadolu photojournalist faced police violence Friday while covering pro-Palestinian protests in Brooklyn
Fatih Aktas experienced police brutality as he was trying to capture images of the New York Police Department’s violent response to the protesters
Footage taken by another journalist shows Aktas being forcefully shoved by a police officer while attempting to photograph the protests
"While I was trying to capture the police intervention in the protests
a police officer strongly pushed me backward," Aktas said
Aktas said that with the help of another police officer and his colleagues
he got back on his feet and continued his work
not noticing his injuries due to the heat of the moment
After the protests he saw bruising on his elbow and felt pain
"I could have hit my head on the ground at that moment
which could have had more severe consequences
I also experienced the violent police intervention against the peaceful protesters," he said
Türkiye's Communications Director Fahrettin Altun condemned the attack
saying: “Press freedom is the backbone of democracy.”
“We will continue to stand by all truthful journalists who fight against injustice and unfairness.”
spokesman for Türkiye's Justice and Development (AK) Party
“We once again express our pride in Anadolu Agency for conveying international sensitivity towards the oppressed Palestinian people,” he said
police violently intervened in protests held in support of Palestine in front of New York’s Brooklyn Museum
The protesters occupied parts of the museum to protest Israel's attacks on the Gaza Strip
particularly the recent Israeli attack on Rafah
New York Police detained dozens of pro-Palestinian supporters
and journalists captured moments of a police officer throwing a female protester to the ground and punching her
More than 36,000 Palestinians have been killed in Gaza in a deadly Israeli offensive on the Gaza Strip since last Oct
Most of those killed have been women and children
Vast tracts of Gaza lay in ruins amid Israel's crippling blockade of food
Israel is accused of genocide at the International Court of Justice (ICJ)
whose latest ruling ordered Tel Aviv to immediately halt its operation in Rafah
where more than 1 million Palestinians had sought refuge from the war.
Lipoxygenases (LOXs) have essential roles in stroke, atherosclerosis, diabetes, and hypertension. 12/15-LOX inhibition was shown to reduce infarct size and brain edema in the acute phase of experimental stroke. However, the significance of 12/15-LOX on neuroinflammation, which has an essential role in the pathophysiology of stroke, has not been clarified yet.
These results suggest that 12/15-LOX inhibition suppresses ischemia-induced inflammation in the acute and subacute phases of stroke via suppressing inflammasome activation. Understanding the mechanisms underlying lipid peroxidation and its associated pathways, like inflammasome activation, may have broader implications for the treatment of stroke and other neurological diseases characterized by neuroinflammation.
Volume 17 - 2023 | https://doi.org/10.3389/fncel.2023.1277268
This article is part of the Research TopicThe Role of Inflammation in Neurodegenerative and Psychiatric DisordersView all 5 articles
Introduction: Lipoxygenases (LOXs) have essential roles in stroke
12/15-LOX inhibition was shown to reduce infarct size and brain edema in the acute phase of experimental stroke
the significance of 12/15-LOX on neuroinflammation
which has an essential role in the pathophysiology of stroke
ischemia/recanalization (I/R) was performed by occluding the proximal middle cerebral artery (pMCAo) in mice
50 mg/kg) or its solvent (DMSO) was injected i.p
at recanalization after 1 h of occlusion
Infarct volumes were calculated on Nissl-stained sections
Neurological deficit scoring was used for functional analysis
Lipid peroxidation was determined by the MDA assay
and caspase-1 were detected with immunofluorescence staining
and lipid peroxidation were significantly attenuated in ML351-treated groups at 6
ELISA results revealed that the pro-inflammatory cytokines IL-1beta
and TNF-alpha were significantly decreased at 6-h and/or 24-h of I/R
while the anti-inflammatory cytokines IL-10 and TNF-alpha were increased at 24-h or 72-h of ML351 treatment
NLRP1 and NLRP3 immunosignaling were enhanced at three time points after I/R
which were significantly diminished by the ML351 application
NLRP3 immunoreactivity was more pronounced than NLRP1
we proceeded to study the co-localization of NLRP3 immunoreactivity with 12/15-LOX and caspase-1
which indicated that NLRP3 was co-localized with 12/15-LOX and caspase-1 signaling
NLRP3 was found in neurons at all time points but in non-neuronal cells 72 h after I/R
Discussion: These results suggest that 12/15-LOX inhibition suppresses ischemia-induced inflammation in the acute and subacute phases of stroke via suppressing inflammasome activation
Understanding the mechanisms underlying lipid peroxidation and its associated pathways
may have broader implications for the treatment of stroke and other neurological diseases characterized by neuroinflammation
Effects of 12/15-LOX inhibition by ML351 on the acute and subacute phases of neuroinflammation following I/R
ROS-induced oxidative stress exacerbates the production of oxidized lipids by the 12/15-lipooxygenase enzyme in the ischemic brain
These oxidized lipids stimulate neuroinflammation and contribute to the pathophysiology of I/R
Neuroinflammation is especially driven by NLRP1 and NLRP3 inflammasome protein complexes
The inflammasomes convert procaspase-1 into its active form caspase-1
Caspase-1 facilitates the cleavage of the pro-inflammatory cytokine
into its active form and leads to the release of IL-1beta from especially neurons at the acute phase of neuroinflammation
Production of other pro-inflammatory cytokines (TNF-alpha
IL-6) is significantly increased at 24 h of stroke which also initiates the synthesis of anti-inflammatory cytokines to protect the tissue itself (TGF-beta
suppresses inflammasome activation by reducing lipid peroxidation and eventually decreases infarct volume and neurological deficit score (NDS)
while providing an inhibitory effect on pro-inflammatory cytokines
it also increases anti-inflammatory cytokines (A graphical abstract was created by Canan Cakir-Aktas and Hulya Karatas)
The role of 12/15-LOX in neuroinflammation is complex and multifaceted
involving the production of pro-inflammatory mediators such as leukotrienes and reactive oxygen species
further research is needed to fully elucidate the role of 12/15-LOX in stroke pathophysiology and determine whether it represents a viable therapeutic target for stroke treatment
this study aimed to investigate the role of 12/15-LOX inhibition by a novel and potent 12/15-LOX inhibitor
on the inflammasome-related neuroinflammation induced by ischemia in acute and subacute phases of the MCAo stroke model in mice
Mice were sacrificed under high-dose chloral hydrate anesthesia at 6
The following scoring system was employed for baseline and postoperative neurological examinations (Bederson et al., 1986)
0: no visible neurological damage (normal); 1: inability to extend the right paw (mild); 2: turn to the opposite side (middle); 3: loss of walking or righting reflex (severe)
Lipid peroxidation was measured by TBARS Assay Kit (OxiSelect TBARS Assay Kit
The principle of this method is based on the formation of a 1:2 conjugate of Malondialdehyde (MDA) with thiobarbituric acid (TBA)
the tissue samples were diluted with 5% butyl hydroxytoluene
and 100 μL of sodium dodecyl sulfate (SDS) lysis solution was added to 100 μL of the sample and incubated at room temperature for 5 min
250 μL TBA solution was added to samples
and the mixtures were incubated at 95°C for 45 min
the mixtures were cooled on ice for 5 min and centrifuged at 10.000 x g for 15 min
200 μL of the supernatant was taken and transferred to a new tube
and 300 μL butanol was added
The mixture was vortexed at 3000 rpm for 3 min and centrifuged at 10.000 x g for 5 min
The absorbances of the supernatants were read at a wavelength of 532 nm in a microplate reader (SpectraMax M2
A standard graph was employed to calculate the results
The results were standardized by dividing the wet tissue weight
the mice were sacrificed with high-dose anesthesia
After the removal of the infarcted brain region
A buffer (25 mM Tris buffer (pH 7.4; 2 mM EDTA
0.1% Triton X-100)) suitable for the biochemical analyses was used for tissue homogenization
After adding buffer and protease inhibitor (1X) to the tissues
they were homogenized at 10% (w/v) by Ultra-Turrax® (S8N-5 g
IKA-Werke GmbH) on ice for 3 × 10 s
All these procedures were performed on ice to prevent protein degradation
100 μL samples were aliquoted from each homogenate and stored in a − 80°C freezer
The remaining homogenates were centrifuged at 13.000 g for 15 min at +4°C
the supernatant was separated from the pellet and used for ELISA
Quantitative expression of inflammatory cytokines (IL-6
and TGF-beta) in the ischemic brain regions was detected by the sandwich ELISA method
United States) were quantified with ELISA kits according to the manufacturer’s protocols
I/R-DMSO and I/R-ML351-treated brain samples were compared
Three mice in each group were analyzed for ELISA
The absorbances of the samples were read at a wavelength of 532 nm on a microplate reader (SpectraMax M2
The curve of the standard graph was employed to calculate the results
The results were normalized by the amount of total protein
which was determined by BCA assay in the samples (ng/mg protein)
mice were transcardially perfused with heparinized saline along with 4% PFA at 6
and 72-h after ischemia (n = 6 mice/group)
The brain tissues were carefully removed and fixed in PFA at 4°C overnight
the brains were sectioned in the coronal plane at a thickness of 12 μm
following overnight incubation in a 30% sucrose solution
The tissue sections were incubated in sodium citrate buffer (pH 6) at 80°C for 15 min for antigen retrieval
they were incubated with normal serum of the associated secondary antibody host (10%) and BSA 1% in TBS for 1 h RT
the sections were incubated with primary antibodies targeting specific proteins
12/15-LOX (kindly provided by Klaus van Leyen) and caspase-1 (Abcam; 1:200)
the sections were washed three times with TBS containing 0.025% Triton X-100 (Merck Millipore
the sections were incubated with appropriate Cy-3 or Alexa Fluor 488 conjugated anti-mouse or anti-rabbit IgG secondary antibodies (Jackson ImmunoResearch 115–165-146 or 115–545-146; 111–165-144 or 111–545-144)
To employ double immunostaining of NLRP1/NeuN
the blocking step was repeated using a 10% normal serum of the associated secondary antibody host
the sections were incubated with appropriate Cy-3 or Alexa Fluor 488 conjugated secondary antibodies (Jackson ImmunoResearch)
the stained tissues were carefully mounted with a PBS/glycerol medium containing Hoechst 33258 (InvitrogenTM) to visualize the cellular nuclei
three images were captured from the peri-infarct area using a Leica TCS SP8 confocal laser scanning microscope (Leica
To quantify the immunofluorescence labeling results
the number of NLRP1 and NLRP3 positive cells was counted by researchers who were blinded to the DMSO and LOX inhibitor treatment groups in the I/R model
The captured images were then analyzed using Image J software (NIH
the results were standardized by calculating the proportion relative to the counts obtained from naive brain tissue
Data were presented as mean ± standard error of the mean (S.E.M.)
Differences among experimental groups were analyzed by student’s t-test or ANOVA followed by Tukey’s post hoc test
Non-normally distributed data of groups were compared using the Kruskal-Wallis test
and the Mann–Whitney U test was used for two-group comparisons as a post hoc test
A p-value ≤0.05 was considered statistically significant
Statistical analyses were carried out using GraphPad Prism software version 6
and pro- and anti-inflammatory cytokine levels in the brain tissues of I/R-DMSO and I/R-ML351 mice
(A) The experimental design of the study is summarized in the schema
ischemia/recanalization (I/R) was performed by proximal middle cerebral artery occlusion in mice
(B) Infarct volume analysis was performed on Nissl-stained sections
Infarct volumes were significantly decreased in ML351-treated groups at 6
(C) Functional outcome was determined with neurological deficit scoring following I/R
Neurological deficit score results showed that 12/15-LOX inhibition significantly improved neurological deficit at all time points (n = 9 mice/group
*p = 0.0420 for 6-h; *p = 0.0170 for 24-h; ***p = 0.0008 for 72-h)
(D) MDA analysis results showed that increased lipid peroxidation after I/R was attenuated with ML351-treatment at all time points (n = 3 mice/group
***p = 0.0004 for 6-h
*p = 0.0196 for 24-h
*p = 0.0414 for 72-h)
(E–G) Quantitative analysis of IL-6
and IL-1beta pro-inflammatory cytokines was done with ELISA (n = 3 mice/group)
data is given as proportioned to the total protein levels of the brain tissue samples (ng/mg protein)
Pro-inflammatory cytokines were induced especially at 24-h following I/R
IL-6 (****p < 0.0001) and TNF-alpha (***p < 0.0004) were suppressed by administration of ML351 at 24-h of ischemia
IL-1beta was increased at 6-h (***p = 0.0002) and 24-h (****p < 0.0001) of I/R and decreased with ML351 treatment at 6-h (**p = 0.003) and 24-h (****p < 0.0001)
(H,I) Quantitative analysis of anti-inflammatory cytokines
with ELISA (n = 3 mice/group)
ML351 induced the IL-10 anti-inflammatory cytokine at 24-h and 72-h of I/R (**p = 0.0069
while TGF-beta was increased at 72-h of I/R by ML351 treatment (***p = 0.0002)
These findings suggest that ML351 treatment plays a crucial role in maintaining the balance between pro- and anti-inflammatory cytokines
which may contribute to its protective effects in reducing tissue damage and neuroinflammation
The prominent increases in IL-10 and TGF-beta levels at 24-h or 72-h respectively
and the significant increase in TGF-beta levels at 72-h provide suggestive evidence that ML351 may have a delayed but potent effect on promoting anti-inflammatory responses
To further explore I/R-induced neuroinflammation
we investigated the involvement of inflammasomes in ischemia-induced tissue damage
This suggested that neuronal NLRP1 inflammasome activation contributes to the inflammatory response following cerebral ischemia
the decrease in NLRP1 immunoreactivity with ML351 treatment indicated that 12/15-LOX inhibition may have a protective effect against inflammasome-mediated inflammation in this model
Immunofluorescence analysis of NLRP1 inflammasome at 6-h
(A) NLRP1 inflammasome protein was detected with immunofluorescence staining (n = 5 mice/group)
Images of Hoechst-33258-labeled cell nuclei (blue) were overlapped with the images of NLRP1 (40X
scale bar = 25 μm)
whose expression was increased in the cell cytoplasm 6
was decreased by 12/15-LOX inhibition (ML351)
In the ML351 treated group at 24-h after I/R
NLRP1 appears to be expressed in both the soma and its axonal extension
which may indicate that it is neuronal (White arrow)
(B) Quantitative analysis showed that NLRP1 increased in DMSO groups at 6-h (**p = 0.002)
24-h (****p < 0.0001)
and 72-h (**p = 0.0013) (n = 3 mice/group) and decreased with ML351 treatment
(C) Double labeling of NLRP1 (red) and neurons (NeuN; neuronal marker) (green) showed that NLRP1 is colocalized with the NeuN signal
Some of the overlapping markings are shown with arrows
This change in cellular source suggests that NLRP3 may play a role in both neuronal and non-neuronal cells during the progression of I/R
Further investigation is needed to determine the specific functions of NLRP3 in these different cell types and its implications for stroke pathology
Immunofluorescence analysis of NLRP3 inflammasome at 6-h
Representative images of NLRP3 (red) and Hoechst-33258 (blue) were overlapped (40X
Cytoplasmic NLRP3 labeling was increased in the DMSO groups of the acute and subacute phases of I/R
labeling and signal intensity of NLRP3 were dramatically decreased at all time points following I/R
(B) Graphical representation of the changes in cell numbers with positive NLRP3 immunoreactivity at 6
NLRP3 positive cell numbers were increased in both the acute (6 and 24-h) and subacute (72-h) phases of I/R
The decreases in NLRP3 immunoreactivity at 6-h (***p = 0.0003)
24-h (**p = 0.0027) and 72-h (****p < 0.0001) with ML351 treatment were statistically significant (n = 3 mice/group)
(C) Double immunolabeling of NLRP3 (red) and neurons (NeuN; neuronal marker) (green) showed that NLRP3 is colocalized with NeuN (white arrows) signal especially at 6-h and 24-h after I/R
At 72-h of I/R NLRP3 immunoreactivity was present both in neurons (white arrows) and non-neuronal cells (black arrows)
(D) Comparison of NLRP3 and NLRP1 staining in I/R-DMSO groups normalized to naive brain tissue
NLRP3 immunostaining was significantly increased compared to NLRP1 immunoreactivity (****p < 0.0001)
suppressed neuroinflammation by inhibiting the NLRP3 inflammasome at 6-h
and NLRP3/Caspase-1 immunolabelling at 6-h
Nuclei were stained with Hoechst-33258 (blue) (40X
(A) Representative images of NLRP3 (green)
and Hoechst-33258 (blue) were overlapped in the third panel (n = 3)
Double labeling of NLRP3 and 12/15-LOX showed that there was a strong colocalization that acted in parallel and decreased in ML351-treated brains at all time points of I/R
a downstream effector of inflammasome activation
staining indicated that caspase-1 is increased mainly at 24-h and 72-h of I/R
(C) NLRP3 and caspase-1 double labeling was performed at 24-h of I/R brains
as prominent caspase-1 activation was observed at this time point
which revealed that caspase-1 positive cells were also positive for NLRP3
These results suggested that the increased expression of caspase-1 in the I/R groups was closely associated with the activation of the NLRP3 inflammasome
which was effectively inhibited by the administration of the 12/15-LOX inhibitor
these findings highlight the potential therapeutic benefits of targeting the 12/15-LOX pathway to reduce neuroinflammation via the inflammasome pathway and improve outcomes in ischemic stroke which were summarized in the graphical abstract figure
the findings of this study suggest that ML351
exerts protective effects in an I/R mouse model by reducing tissue damage
and modulating the production of pro- and anti-inflammatory cytokines
mediated by the inhibition of NLRP1 and NLRP3 inflammasome activation
which may play a crucial role in the inflammatory response following cerebral ischemia
Targeting the 12/15-LOX pathway and inflammasome activation could be a potential therapeutic strategy for reducing neuroinflammation and improving outcomes in ischemic stroke
anti-inflammatory cytokine (TGF-beta and IL-10) results displayed that TGF-beta was decreased after the stroke at all time points and only recovered at 72-h with 12/15-LOX inhibitor
IL-10 levels were increased prominently at 24-h of stroke with 12/15-LOX inhibition
These results suggest that the anti-inflammatory reaction of 12/15-LOX inhibition is mediated by IL-10 response at the acute phase while TGF-beta responds at the subacute phase of ischemia
This highlights the potential therapeutic benefits of ML351 in reducing neuroinflammation following I/R and the timing of targeted inflammatory reaction has utmost importance
That is why our study highlights the importance of considering multiple pathways and their interactions in the development of stroke treatment
This research also provides valuable insights into the complex nature of inflammatory responses and offers potential avenues for future research and treatment options
Further studies focusing on the crosstalk between lipid peroxidation
and other cell death pathways may shed light on the pathophysiological mechanism of each process and might provide novel therapeutic targets for relevant diseases
our findings suggest that targeting NLRP1 or NLRP3 inflammasome activation by 12/15-LOX inhibition may be a promising approach for reducing inflammation and improving outcomes in I/R injury
this study emphasizes the significance of understanding the cellular sources and expression patterns of key inflammatory molecules at different stages of stroke progression
we may have a better understanding of the underlying mechanisms driving stroke pathophysiology
Opposite studies may be related to the complex and dynamic nature of the inflammatory response in stroke
which involves multiple cell types and signaling pathways
Further research is needed to elucidate the precise mechanism underlying the effects of 12/15-LOX inhibition on post-stroke inflammation and to explore its potential as a therapeutic target for stroke
a comprehensive understanding of its role in stroke pathogenesis is crucial for developing effective interventions
Limitations of our study include the low number of mice used in some experiments
we tried to increase the accuracy of the results by obtaining at least 3 images from consecutive periinfarct areas and repeating ELISA studies 2–3 times
Yet we obtained statistically significant results
Another one is studying only brain tissue for ELISA analysis; serum samples would be valuable to compare brain tissue results with circulating cytokines
serum levels of inflammatory cytokines may not represent brain inflammation accurately as there may be other systemic confounding factors
Our results provide new insights into the role of 12/15-LOX in inflammasome signaling and neuronal damage
The activation of the NLRP3 inflammasome in 12/15-LOX-positive cells may contribute to the inflammatory response and neural damage observed in stroke
Targeting this pathway may represent a novel therapeutic strategy for stroke prevention and treatment
our findings highlight the need for further investigation into the mechanisms underlying inflammasome activation in neurons and their contribution to neurological disorders
our study sheds light on the complex interplay between inflammation
and neuronal damage in stroke pathophysiology
further research is needed to fully understand the role of 12/15-LOX in stroke-induced neuroinflammation
the development of specific inhibitors targeting 12/15-LOX may provide a potential therapeutic strategy for stroke patients
It is also important to note that neuroinflammation
and lipid peroxidation are not only involved in stroke but also in other neurological disorders such as Alzheimer’s disease and Parkinson’s disease
understanding the mechanisms underlying lipid peroxidation and its associated pathways may have broader implications for the treatment of various neurological diseases
continued research on lipid peroxidation and its effects on neuroinflammation will contribute to a better understanding of the pathophysiology of stroke and other neurological disorders
ultimately leading to improved treatments and outcomes for patients
these results indicate that one of the possible mechanisms of 12/15-LOX inhibition involves the suppression of neuroinflammation in both the acute and subacute phases of cerebral ischemia/recanalization by suppressing inflammasomes and inflammasome-related proteins
These findings also suggest that 12/15-LOX inhibitors may be a treatment option for stroke therapy or other diseases characterized by neuroinflammation
The original contributions presented in the study are included in the article/supplementary material
further inquiries can be directed to the corresponding author
The animal study was approved by Hacettepe University
Animal Experiments Ethics Committee (Approval No: 2016/27–04)
The study was conducted in accordance with the local legislation and institutional requirements
The author(s) declare financial support was received for the research
This study was supported by Hacettepe University
Scientific Research Projects Coordination Unit (Project number: THD-2016-11381)
and The Scientific and Technological Research Council of Türkiye (TÜBİTAK) (Project number: 118S131)
and Esra Buber for their helpful insights into the project
We also cordially thank technician Mesut Firat who helped with the experiments
The reviewer EE declared a shared affiliation with the author KL to the handling editor at the time of review
The handling editor EK declared a past co-authorship with the author MY
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations
Any product that may be evaluated in this article
or claim that may be made by its manufacturer
is not guaranteed or endorsed by the publisher
Inhibition of the inflammasome complex reduces the inflammatory response after thromboembolic stroke in mice
NLRP3 inflammasome in ischemic stroke: as possible therapeutic target
NLRP3 inflammasome activity is negatively controlled by miR-223
Rat middle cerebral artery occlusion: evaluation of the model and development of a neurologic examination
NLPR3 inflammasome inhibition alleviates hypoxic endothelial cell death in vitro and protects blood-brain barrier integrity in murine stroke
The interaction between ferroptosis and inflammatory signaling pathways
Neuronal NLRP3 inflammasome mediates spreading depolarization-evoked trigeminovascular activation
A small-molecule inhibitor of the NLRP3 inflammasome for the treatment of inflammatory diseases
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Extent of ischemic brain injury after thrombotic stroke is independent of the NLRP3 (NACHT
LRR and PYD domains-containing protein 3) Inflammasome
Lipid regulation of NLRP3 inflammasome activity through organelle stress
Nuclear factor E2-related Factor-2 negatively regulates NLRP3 Inflammasome activity by inhibiting reactive oxygen species-induced NLRP3 priming
12/15-lipoxygenase inhibition or knockout reduces warfarin-associated hemorrhagic transformation after experimental stroke
NLRP3 inflammasome contributes to inflammation after intracerebral hemorrhage
Neuroinflammatory mechanisms in ischemic stroke: focus on Cardioembolic stroke
Nitric oxide suppresses NLRP3 inflammasome activation and protects against LPS-induced septic shock
Correcting for brain Swelling's effects on infarct volume calculation after middle cerebral artery occlusion in rats
The inflammasome: first line of the immune response to cell stress
A method for generating a mouse model of stroke: evaluation of parameters for blood flow
Temporal profile of serum anti-inflammatory and pro-inflammatory interleukins in acute ischemic stroke patients
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Mitochondrial DNA in NLRP3 inflammasome activation
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Potent and selective inhibitors of human reticulocyte 12/15-lipoxygenase as anti-stroke therapies
Discovery of potent and selective inhibitors of human reticulocyte 15-lipoxygenase-1
Baicalein ameliorates ischemic brain damage through suppressing proinflammatory microglia polarization via inhibiting the TLR4/NF-kappaB and STAT1 pathway
A model of transient unilateral focal ischemia with reperfusion in the P7 neonatal rat: morphological changes indicative of apoptosis
Mouse model of intraluminal MCAO: cerebral infarct evaluation by cresyl violet staining
Characterization of an acetyl-11-keto-beta-boswellic acid and arachidonate-binding regulatory site of 5-lipoxygenase using photoaffinity labeling
Leukotriene B4 receptor antagonist LY293111 inhibits proliferation and induces apoptosis in human pancreatic cancer cells
The potential of 12/15-lipoxygenase inhibitors in stroke therapy
Baicalein and 12/15-lipoxygenase in the ischemic brain
Structure-activity relationship studies of nordihydroguaiaretic acid inhibitors toward soybean
Relevant mediators involved in and therapies targeting the inflammatory response induced by activation of the NLRP3 inflammasome in ischemic stroke
Inhibition of 12/15-lipoxygenase as therapeutic strategy to treat stroke
Cepharanthine attenuates cerebral ischemia/reperfusion injury by reducing NLRP3 inflammasome-induced inflammation and oxidative stress via inhibiting 12/15-LOX signaling
van Leyen K and Karatas H (2023) 12/15-lipoxygenase inhibition attenuates neuroinflammation by suppressing inflammasomes
Received: 14 August 2023; Accepted: 07 September 2023; Published: 26 September 2023
Copyright © 2023 Cakir-Aktas, Bodur, Yemisci, van Leyen and Karatas. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY)
*Correspondence: Hulya Karatas, aHVseWFrQGhhY2V0dGVwZS5lZHUudHI=
Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.
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Volume 9 - 2022 | https://doi.org/10.3389/fmats.2022.845700
This article is part of the Research TopicPolymer Blends for Drug Release SystemsView all 10 articles
tremendous devices and materials such as stents
and vessels have been developed for medical purposes
When such devices are utilized in the body
the side effects or biocompatibility of the materials have to be studied extensively
Interdisciplinary studies have reviled numerous strategies to overcome adverse body reactions against implanted devices
Besides naturally occurring materials such as collagen
various synthetic and modified materials such as poly(lactic acid)
and poly(acrylamide) have been accomplished
progress in polymer science makes hydrogels a valuable candidate for those utilizations
hydrogels received enormous attention as drug delivery devices because of their unique properties
such as soft structure and responsive capabilities based on the functional group attached
the developments in synthetic materials have brought out numerous materials for medical and pharmaceutical applications
have drawn considerable attention over hydrogels because of superior properties such as the coexistence of organic and aqueous phases and viscoelastic bi-phasic natures
They were prepared in bulk forms and nano-scale dimensions
which allow them to be utilized more extensively
These incredible structures provide them with extensive features to be utilized from head to toe in every aspect of health care application
we will focus on some of the pioneering perspectives of organo-hydrogels particularly accomplished in clinical therapy and the use of their biodegradable
target-responsive properties as sensing components in novel microscale apertures
This short review focuses on recent advances of engineered organogels for medical
and drug delivery platforms and their utilization
it will not cover important studies relevant to significant drug delivery materials and methods that have been tremendously studied recently
Bernard et al. (2018) presented a detailed investigation on the biocompatibility of polymer-based biomaterials and clinical devices
Although the biocompatibility tests are in evaluation
useful studies are available to decide the final product
biocompatibility assessment must be carried out in three steps as follow:
i) Polymer granules or bland: determining being extractable and leachable (antioxidants
ii) Polymer films and sheets or generation by spin coating technique: surface functional group
primary evaluation of sterilization impacts
iii) Specimen representative of the final product: protein adhesion, cell viability, cytotoxicity, hemocompatibility, in vivo studies, and being leachable (Bernard et al., 2018)
We investigate recent studies on the application of organogels; this area provides opportunities for future research on controlled drug delivery and medical utilizations (Table 1)
Summary of papers describing drug delivery application of materials
A new bigel was synthesized by mixing guar gum hydrogel and sorbitan monostearate-sesame oil-based organogel and evaluated as a controlled drug release system (Singh et al.
and viscoelastic structure of bigels were investigated
it was observed that the amount of ciprofloxacin drug release increased with the decrease in organogel content
it has been found that drug release from all bigels conforms to the desired zero-order diffusion kinetics for a controlled release system
When drug-loaded bigels were examined in terms of antimicrobial activity
they had a good effect against Bacillus subtilis
and it was predicted that they could be considered a drug release system
(A) Schematic representation of organogels preparation
(B) Schematic representation of drug loading to organogels
(C) Application of drug-loaded organogels in a film form
(D) Application of drug-loaded organogels in an injectable form (in nano-scale)
we have focused on some recent developments of drug delivery platforms
particularly organogels based applications
We tried to give a point of view of state of the art
It is expected that organogels will be utilized at a gradually increasing level in the coming years because of their unique characteristics such as biocompatibility
These properties enable organogels to be applied with enormous potential applications in drug delivery
All authors listed have made a substantial
and intellectual contribution to the work and approved it for publication
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.The reviewer AT declared a shared affiliation
with the authors to the handling editor at the time of the review
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations or those of the publisher
Which Is More Effective for Protein Adsorption: Surface Roughness
Case Study of Polyurethane Films Prepared from castor Oil and Poly(ethylene Glycol)
CrossRef Full Text | Google Scholar
Synthesis and Characterization of Novel Organo-Hydrogel Based agar
Glycerol and Peppermint Oil as a Natural Drug Carrier/release Material
CrossRef Full Text | Google Scholar
Development of Onion Oil-Based Organo-Hydrogel for Drug Delivery Material
CrossRef Full Text | Google Scholar
Evaluation of poly(agar-co-glycerol-co-castor Oil) Organo-Hydrogel as a Controlled Release System Carrier Support Material
CrossRef Full Text | Google Scholar
A Garlic Oil-Based Organo-Hydrogel for Use in pH-Sensitive Drug Release
CrossRef Full Text | Google Scholar
Use of Coconut Oil-Based Organo-Hydrogels in Pharmaceutical Applications
CrossRef Full Text | Google Scholar
Organogels in Drug Delivery: A Special Emphasis on Pluronic Lecithin Organogels
PubMed Abstract | CrossRef Full Text | Google Scholar
PubMed Abstract | CrossRef Full Text | Google Scholar
Biodegradation and Biocompatibility of PLA and PLGA Microspheres
CrossRef Full Text | Google Scholar
Rationalizing the Design of Polymeric Biomaterials
PubMed Abstract | CrossRef Full Text | Google Scholar
“Biomedical Membranes from Hydrogels and Interpolymer Complexes,” in Biopolymers Ii
Langer (Berlin/Heidelberg: Springer-Verlag)
CrossRef Full Text | Google Scholar
Biocompatibility of Polymer-Based Biomaterials and Medical Devices - Regulations,in Vitroscreening and Risk-Management
PubMed Abstract | CrossRef Full Text | Google Scholar
Supramolecular Engineering of Hydrogels for Drug Delivery
PubMed Abstract | CrossRef Full Text | Google Scholar
Modern Drug Delivery Applications of Chitosan
PubMed Abstract | CrossRef Full Text | Google Scholar
A Comparative Biocompatibility Study of Microspheres Based on Crosslinked Dextran or Poly(lactic-Co-Glycolic)acid after Subcutaneous Injection in Rats
doi:10.1002/1097-4636(20010915)56:4<600::aid-jbm1133>3.0.co;2-i
CrossRef Full Text | Google Scholar
Controlled Release of Testosterone by Polymer-Polymer Interaction Enriched Organogel as a Novel Transdermal Drug Delivery System: Effect of Limonene/PG and Carbon-Chain Length on Drug Permeability
CrossRef Full Text | Google Scholar
A Novel Flunarizine Hydrochloride-Loaded Organogel for Intraocular Drug Delivery In Situ: Design
Physicochemical Characteristics and Inspection
CrossRef Full Text | Google Scholar
Mussel Adhesive Protein Mimetic Polymers for the Preparation of Nonfouling Surfaces
CrossRef Full Text | Google Scholar
Thermo/glutathione-sensitive Release Kinetics of Heterogeneous Magnetic Micro-organogel Prepared by Sono-Catalysis
PubMed Abstract | CrossRef Full Text | Google Scholar
CrossRef Full Text | Google Scholar
In Vitro and In Vivo Biocompatibility of Dextran Dialdehyde Cross-Linked Gelatin Hydrogel Films
PubMed Abstract | CrossRef Full Text | Google Scholar
Response Surface Methodology as a Useful Tool for Development and Optimization of Sustained Release Ketorolac Tromethamine Niosomal Organogels
CrossRef Full Text | Google Scholar
Application of Poly (Agar-Co-Glycerol-Co-Sweet Almond Oil) Based Organo-Hydrogels as a Drug Delivery Material
CrossRef Full Text | Google Scholar
Promising Drug Delivery Systems: an Update of State-Of-The-Art and Recent Applications
CrossRef Full Text | Google Scholar
Development and Characterization of Gel-In-Water Nanoemulsion as a Novel Drug Delivery System
CrossRef Full Text | Google Scholar
Gel-in-water Nanodispersion for Potential Application in Intravenous Delivery of Anticancer Drugs
CrossRef Full Text | Google Scholar
Ancient Egyptian Medicine: [A Bibliographical Demonstration in the Library of the Faculty of Physicians and Surgeons
PubMed Abstract | CrossRef Full Text | Google Scholar
Biocompatibility of Implantable Synthetic Polymeric Drug Carriers: Focus on Brain Biocompatibility
PubMed Abstract | CrossRef Full Text | Google Scholar
Carbon Dots Fabrication: Ocular Imaging and Therapeutic Potential
PubMed Abstract | CrossRef Full Text | Google Scholar
“Structure and Applications of Poly(vinyl Alcohol) Hydrogels Produced by Conventional Crosslinking or by Freezing/thawing Methods,” in Biopolymers/Pva Hydrogels/Anionic Polymerisation Nanocomposites
Switzerland: Springer International Publishing AG)
Google Scholar
Organogels Based on Amino Acid Derivatives and Their Optimization for Drug Release Using Response Surface Methodology
PubMed Abstract | CrossRef Full Text | Google Scholar
Polymer-polymer Interdiffusion and Adhesion
CrossRef Full Text | Google Scholar
Evolution of Macromolecular Complexity in Drug Delivery Systems
PubMed Abstract | CrossRef Full Text | Google Scholar
Implantable Applications of Chitin and Chitosan
PubMed Abstract | CrossRef Full Text | Google Scholar
Novel agar-stearyl Alcohol Oleogel-Based Bigels as Structured Delivery Vehicles
CrossRef Full Text | Google Scholar
Stimuli-responsive Hydrogels for Oral Delivery of High Isoelectric point-exhibiting Therapeutic Proteins
Google Scholar
PubMed Abstract | CrossRef Full Text | Google Scholar
Biocompatibility and Drug Delivery Systems
CrossRef Full Text | Google Scholar
Chemical and Physical Structure of Polymers as Carriers for Controlled Release of Bioactive Agents: A Review
CrossRef Full Text | Google Scholar
Present and Future Applications of Biomaterials in Controlled Drug Delivery Systems
PubMed Abstract | CrossRef Full Text | Google Scholar
A Thermo-Responsive Polyurethane Organogel for Norfloxacin Delivery
CrossRef Full Text | Google Scholar
Evaluation of Organogel Nanoparticles as Drug Delivery System for Lipophilic Compounds
PubMed Abstract | CrossRef Full Text | Google Scholar
Engineering Precision Nanoparticles for Drug Delivery
PubMed Abstract | CrossRef Full Text | Google Scholar
Developing poly(Agar-co-Glycerol-co-Thyme Oil) Based Organo-Hydrogels for the Controlled Drug Release Applications
CrossRef Full Text | Google Scholar
A Review of the Biocompatibility of Implantable Devices: Current Challenges to Overcome Foreign Body Response
CrossRef Full Text | Google Scholar
Biocompatibility Issues of Implantable Drug Delivery Systems
PubMed Abstract | CrossRef Full Text | Google Scholar
Development of Bigels Based on Stearic Acid-Rice Bran Oil Oleogels and Tamarind Gum Hydrogels for Controlled Delivery Applications
CrossRef Full Text | Google Scholar
Nanocarriers as an Emerging Platform for Cancer Therapy
CrossRef Full Text | Google Scholar
Hydrogels in Biology and Medicine: From Molecular Principles to Bionanotechnology
CrossRef Full Text | Google Scholar
Physicochemical Foundations and Structural Design of Hydrogels in Medicine and Biology
PubMed Abstract | CrossRef Full Text | Google Scholar
Hydrogels as Mucoadhesive and Bioadhesive Materials: A Review
PubMed Abstract | CrossRef Full Text | Google Scholar
CrossRef Full Text | Google Scholar
Sodium Alginate in Oil-Poloxamer Organogels for Intravaginal Drug Delivery: Influence on Structural Parameters
Cytotoxicity and In Vitro Antifungal Activity
CrossRef Full Text | Google Scholar
In Vivo biocompatibility Study of ABA Triblock Copolymers Consisting of poly(L-Lactic-Co-Glycolic Acid) A Blocks Attached to central Poly(oxyethylene) B Blocks
doi:10.1002/(sici)1097-4636(199601)30:1<31::aid-jbm5>3.0.co;2-s
CrossRef Full Text | Google Scholar
Biocompatibility of ABA Triblock Copolymer Microparticles Consisting of poly(L-Lactic-Co-Glycolic-Acid) A-Blocks Attached to central Poly(oxyethylene) B-Blocks in Rats after Intramuscular Injection
CrossRef Full Text | Google Scholar
Engineered Drug Delivery Devices to Address Global Health Challenges
CrossRef Full Text | Google Scholar
Parallel Evolution of Polymer Chemistry and Immunology: Integrating Mechanistic Biology with Materials Design
PubMed Abstract | CrossRef Full Text | Google Scholar
Modified Biofunctional P(tannic Acid) Microgels and Their Antimicrobial Activity
CrossRef Full Text | Google Scholar
Core-shell-type Organogel-Alginate Hybrid Microparticles: A Controlled Delivery Vehicle
CrossRef Full Text | Google Scholar
4-Vinylpyridine-Based Smart Nanoparticles with N-Isopropylacrylamide
and Methacrylic Acid for Potential Biomedical Applications
CrossRef Full Text | Google Scholar
PubMed Abstract | CrossRef Full Text | Google Scholar
Nanoparticle-Embedded Super Porous P(HEMA) Cryogels as Wound Dressing Material
CrossRef Full Text | Google Scholar
Self-Crosslinked Ellipsoidal Poly(Tannic Acid) Particles for Bio-Medical Applications
PubMed Abstract | CrossRef Full Text | Google Scholar
Degradable Hyaluronic Acid Microparticles for Sustainable Drug Delivery Application
PubMed Abstract | CrossRef Full Text | Google Scholar
Cryogel Composites Based on Hyaluronic Acid and Halloysite Nanotubes as Scaffold for Tissue Engineering
CrossRef Full Text | Google Scholar
Responsive Biopolymer-Based Microgels/nanogels for Drug Delivery Applications
Stimuli Responsive Polymeric Nanocarriers Drug Deliv
CrossRef Full Text | Google Scholar
Implementation of Quality by Design (QbD) Approach in Development of Silver Sulphadiazine Loaded Egg Oil Organogel: An Improved Dermatokinetic Profile and Therapeutic Efficacy in Burn Wounds
CrossRef Full Text | Google Scholar
Surface Chemistry Influences Implant Biocompatibility
PubMed Abstract | CrossRef Full Text | Google Scholar
Preparation of Thermosensitive Polymeric Organogels and Their Drug Release Behaviors
CrossRef Full Text | Google Scholar
Platelet adhesion to polystyrene-based surfaces preadsorbed with plasmas selectively depleted in fibrinogen
PubMed Abstract | CrossRef Full Text | Google Scholar
Polymeric Chitosan-Based Vesicles for Drug Delivery
CrossRef Full Text | Google Scholar
Polymeric Systems for Controlled Drug Release
PubMed Abstract | CrossRef Full Text | Google Scholar
Organogels as Novel Carriers for Dermal and Topical Drug Delivery Vehicles
CrossRef Full Text | Google Scholar
doi:10.1615/critrevtherdrugcarriersyst.v15.i5.30
PubMed Abstract | CrossRef Full Text | Google Scholar
Biofabrication of Chitosan-Based Nanomedicines and its Potential Use for Translational Ophthalmic Applications
CrossRef Full Text | Google Scholar
Effects of the Chemical Structure and the Surface Properties of Polymeric Biomaterials on Their Biocompatibility
PubMed Abstract | CrossRef Full Text | Google Scholar
PubMed Abstract | CrossRef Full Text | Google Scholar
CrossRef Full Text | Google Scholar
Recent Advances of Organogels: from Fabrications and Functions to Applications
CrossRef Full Text | Google Scholar
Antimicrobial Activity and Biocompatibility of Slow-Release Hyaluronic Acid-Antibiotic Conjugated Particles
CrossRef Full Text | Google Scholar
Alpaslan D and Dudu TE (2022) Polymeric Organo-Hydrogels: Novel Biomaterials for Medical
Received: 30 December 2021; Accepted: 24 February 2022;Published: 18 March 2022
Copyright © 2022 Aktas, Alpaslan and Dudu. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use
*Correspondence: Nahit Aktas, bmFoaXQuYWt0YXNAbWFuYXMuZWR1Lmtn
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“No Man’s Land” is Deniz Aktaş’s first solo show at artSümer
The exhibition features Aktaş’s rigorous drawings that are daring depictions of unsound structures
still-life myths with questionable existence
remnants of an archaic image that made it to today.
Aktaş examines traumas in urban memory through human and environment relations
The images carefully depicted by the artist bear the marks of urban transformation
demolishment and even the traces of conflict observable on the buildings of a complicated
leave the viewers feeling caught in a whirlpool or lost in a labyrinth
Pine Bush Central School District
Dan Aktas has an excitement about him when he starts talking 3D printing
an art and technology teacher at Pine Bush High School
was named the High School Art Teacher of the Year for 2019-2020 from the New York State Art Teachers Association
“I am so honored to receive the Region 7 New York State High School Art Teacher of the Year recognition
I received this recognition in large part for the 3D printing art class I developed here at the high school called Art & Fabrication,” said Aktas
“I am very excited to continue working with all of the teachers and administrators who feel so strongly about supporting students through our art and manufacturing programs.”
An art teacher heard Aktas speak at a conference and was so impressed by him
his passion about art and technology and his skill that she nominated him for the distinction
noting that he developed and implemented “the first fine art 3D printing course at Pine Bush called Art & Fabrication to support students’ creativity with digital manufacturing equipment.”
Aktas received his bachelor of fine arts in Ceramics at SUNY New Paltz while exploring digital printing technologies and his Masters at NYU Steinhardt for Art Education with an emphasis on social justice
“Dan is an amazing teacher who is always looking to create authentic projects to keep his students engaged,” said Aaron Hopmayer
“Annually he works with the elementary and middle school students to expose them to the exciting opportunities that await them in high school.”